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Genes induced under drought in both Andean potato clones, SA2563 and Sullu
SA2563Sullu
ProbeGene nameStGI TCFunctiond23d 42d 23d 42
CELL GROWTH, CELL DIVISION AND DNA SYNTHESIS
STMGM76Extensin protein-likeTC118596 cell elongationns2.3ns2.4
STMIF12Periaxin-like proteinTC132202extensin domainsns2.53.9ns
STMGR75 STMDP13Origin recognition complex subunit 1-like proteinTC128634 TC120839 DNA replicationns2.2ns2.9
TRANSCRIPTION
DNA-binding
STMCH76DNA-binding protein DF1TC113629 TC127716 DNA-binding2.82.12.2ns
Transcription Factor
STMEU37CaCBF1B (DREB-like)TC116037transcription factor7.6ns6.8ns
STMDJ76DNA-binding protein 3TC120484transcription factor4.6ns4.4ns
STMHA63 STMEF49 STMEG07 STMET20DNA-binding protein 4TC112852 TC112853transcription factor6.53.63.5ns
STMHQ55 STMID35G-box-binding protein TAF-3 TC114402transcription factor4.56.52.34.4
STMIZ28Homeobox-leucine zipper protein HAT22TC127382transcription factor2.22.5ns3.0
STMCM32Homeodomain leucine zipper protein HDZ2TC121639 TC129714transcription factor2.86.3ns4.0
STMIK23Homeodomain leucine zipper protein HDZ2TC129714 transcription factor2.65.3ns3.8
STMHT30Homeotic protein Athb-7TC113966transcription factor9.522.9ns9.5
STMGG58I-box binding factorTC115595transcription factor2.23.6ns3.6
STMIY82Jasmonic acid 2TC120089 TC120090transcription factor3.57.03.53.4
STMHF70Transcription factor Myb1TC112028 TC112033 TC112033transcription factorns2.8ns2.9
STMJD19RD 26, similar to NAM family proteinTC128464transcription factor3.66.44.65.9
STMIW03WIZZTC130471transcription factor6.7ns20.7ns
STMEP07WIZZTC121628transcription factorns2.46.8ns
STMHY53WRKY3TC113340transcription factor2.93.06.0ns
STMIU36 STMIZ09WRKY1TC128904transcription factor2.7ns2.6ns
STMJC11WRKY-type transcription factorTC118798transcription factor4.0ns2.5ns
STMDT03SCARECROW transcriptional regulator-like proteinTC120067transcription factor4.02.58.9ns
STMDH07Putative CCAAT-binding transcription factorTC120344 TC120345 TC128542transcription factor3.13.7ns2.0
STMHU70Putative CCAAT-binding transcription factorTC128542 transcription factor7.1nsns2.5
STMGW72Probable CCCH-type zinc finger proteinTC126625transcription factorns5.5ns2.9
STMHX38Similar to basic helix-loop-helix family protein TC115176transcription factor3.27.7ns3.8
STMCN79 STMFB71SPF1 protein TC126464transcription factor3.8ns5.5ns
STMHE15Transcription factor - fava beanTC126883transcription factor2.52.5ns2.7
STMJB52Transcription factor Pti4 TC120677transcription factor2.7ns5.6ns
STMDH60Tuber-specific and sucrose-responsive element binding factor TC119970transcription control2.03.7ns3.2
PROTEIN SYNTHESIS
RNA-binding & processing
STMCV61 STMDS18RNA helicaseTC112178 RNA-bindingns2.6ns2.0
STMGE78RNA-binding glycine-rich protein-1 TC125914 RNA-binding3.16.7ns8.4
Ribosomal Proteins
STMIT3160S ribosomal protein L18TC123005 ribosomal protein2.9ns4.8ns
Translation
STMEY59Translation initiation factor-like proteinTC120168 translation2.22.83.1ns
CELL COMMUNICATION AND SIGNALING
STMES89Calcium related proteinTC130469 Ca-binding2.6ns6.4ns
STMIN72Calmodulin-like proteinTC117168 Ca-binding2.53.14.6ns
STMER65Calmodulin-like proteinTC128019 putative Ca-binding2.7ns2.2ns
STMHL92 STMHU62 STMHP72Similar to IQ domain-containing protein TC119109 TC19110calmodulin bindingns8.5ns7.6
Signaling
STMEF62 STMJL27SCARECROW phytochrome A signal transductionTC128201 phytochrome A signaling2.62.05.2ns
GTP/ATP-binding
STMIV50Extra-large G-protein-likeTC115948 GTP-binding2.9ns3.2ns
STMIZ21Expressed proteinTC115383 GTP-bindingns3.02.2ns
Kinases and Phosphatases
STMIL26Probable serine/threonine-specific protein kinaseTC127763 putative kinase3.62.9ns2.1
STMGX18CBL interacting protein kinase 4TC112635 kinase2.63.2ns2.6
STMJC86Protein kinase homologTC115960 putative kinase2.42.43.0ns
STMCR96Serine/threonine kinase SNFL1TC117710 kinase2.4ns2.4ns
STMGQ87MAPK 3TC120898 TC120899 kinase2.1ns3.4ns
STMDC87Osmotic stress-activated protein kinaseTC121412 kinasens3.2ns3.0
STMHO79 STMHS17Protein phosphatase 2CTC119843 phosphatase8.011.8ns10.3
STMGN10Probable protein phosphatase 2CTC114133 TC114134 phosphatase5.15.6ns6.9
STMCY12Similar to protein phosphatase 2C-related TC119910 phosphatase3.73.7ns2.8
STMJB25Similar to plant acid phosphatase/mechanosensitive ion channel domain-containing protein TC129875 TC131320 phosphatase4.6ns4.5ns
STMGM24Similar to protein phosphatase 2C family protein TC116723 TC131824 putative phosphatase4.4ns6.7ns
STMGP26Avr9/Cf-9 rapidly elicited protein 284TC131877 putative phosphatase12.7ns7.9ns
STMIQ20Similar to protein-tyrosine phosphatase 3 TC123816 phosphatase2.1ns4.1ns
HORMONE
STMIO05Weakly similar to GRAM domain-containing protein / ABA-responsive proteinTC122632 response to ABA2.1ns10.0ns
PHOTOSYNTHESIS, ELECTRON TRANSPORT, ENERGY
STMIC42 STMIX48 STMJO47Early light-inducible protein precursorTC112878 chlorophyll-bindingns2.13.9ns
STMIP26Alternative oxidase 1bTC128935 electron transport active oxygen scavanging5.13.511.4ns
PROTEIN DESTINATION AND TURN-OVER
STMHU46Similar to leucine-rich repeat family protein TC113314 protein binding3.4nsns6.6
STMJC63Nuclear localization signal binding protein TC122347 protein destination15.415.6ns6.2
STMHO95O-linked N-acetyl glucosamine transferaseTC113570O-glycosylation2.52.8ns2.1
STMEP09 STMIA47F-box family protein TC112748 ubiquitin cycle2.83.92.6ns
STMJD82Ubiquitin extension protein TC111853ubiquitin cyclens2.42.42.5
METABOLISM
Carbohydrate Metabolism
STMGU01Similar to beta-amylase TC118938 TC118938 TC118991 starch metabolism2.42.6ns2.1
STMHA65Beta-amylaseTC126648 starch metabolism4.23.5ns2.7
STMGD25Neutral invertaseTC118858 TC124949 sugar metabolism5.55.8ns2.9
STMGN62Neutral invertaseTC118858 sugar metabolism5.26.9ns2.7
Sugar Interconversion
STMCN30 STMIQ46UDP-glucose 4-epimeraseTC128003 glucose galactose interconversion5.26.0ns4.1
Citrat Cycle, Glycolysis
STMDG22Pyruvate kinase isozyme ATC126332 glycolysis2.12.6ns2.0
Amino Acid Metabolism
STMHV15Delta-1-pyrroline-5-carboxylate dehydrogenaseTC126656 proline biosynthesis3.55.5ns3.1
STMGU82Delta 1-pyrroline-5-carboxylate synthetaseTC128842 proline biosynthesis9.911.6ns5.9
STMCP25CIG1, proline oxidaseTC127497 TC127497 proline catabolism2.0ns5.5ns
STMJA37Histidine decarboxylaseTC120565histidine metabolism3.0ns4.3ns
STMEP88Histidine decarboxylaseTC120566 histidine metabolism2.8ns5.4ns
STMHT083-methyl-2-oxobutanoate dehydrogenaseTC115779 TC124955 valine, leucine, isoleucine metabolism3.28.7ns2.8
Lipid Metabolism
STMDT79Wax synthase isoform 3TC114713 lipid metabolism2.72.9ns2.4
STMCV45Fatty acid elongase-like protein (cer2-like)TC114172 lipid metabolismns2.8ns2.2
STMIT77GDSL-motif lipase/hydrolase-like proteinTC123586 lipid metabolismns2.4ns10.3
STMGV44Lipase homologTC129627 lipid metabolism2.2nsns2.1
STMEU40Esterase/lipase/thioesterase family protein TC123911 lipid metabolism2.54.32.4ns
STMGR44Lipid transfer protein 1TC126089 lipid transfer8.915.1ns4.6
STMGN69Lipid transfer protein 1TC126632 lipid transfer5.411.8ns8.2
STMGQ20Lipid transfer protein 2TC126090 lipid transfer7.210.9ns3.2
STMCS65Lipid transfer protein 2TC126088 lipid transferns2.72.73.3
Metabolism of Vitamins and Cofactors
STMII80Thiamine-phosphate pyrophosphorylaseTC116260 thiamine metabolism2.93.42.9ns
STMII15 STMCQ94 S-adenosylmethionine synthetase 1 TC118975 methyl and propylamino donor2.02.2ns2.3
Secondary (Aromatic) Metabolism
STMCL31S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferaseTC113859 TC113860 secondary metabolism3.75.22.23.7
STMIY784-coumarate-CoA ligase-like protein TC119296 phenylpropanoid metabolism2.2ns2.4ns
STMJE63N-hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyl transferase THT7-8TC112913 TC112915 phenylpropanoid metabolism2.1ns2.7ns
STMEZ84N-hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyl transferase THT7-9TC112914 phenylpropanoid metabolism2.3ns3.9ns
STMHT83 STMIX43Cinnamoyl-CoA reductase-like proteinTC127955 lignin biosynthesis4.76.94.3ns
STMFB084-coumarate-CoA ligase-like protein TC120149 lignin synthesisns2.42.8ns
STMGP67Putative muconate cycloisomerase-like proteinTC119787 polyphenol metabolism2.53.3ns2.9
Other Metabolical Activities
STMIZ85Monooxygenase 1 TC127597 monooxygenase3.6ns6.1ns
STMCV02EpoxidaseTC118413 epoxidase activity5.33.6ns2.2
TRANSPORT
STMDD63Ca2+/H+-exchanging protein - mung bean {Vigna radiata;}TC112494 TC121283 kation transport2.23.42.3ns
STMIQ28CLC-Nt2 proteinTC128993 chloride transportns2.1ns6.3
STMJG07 STMEW02Syntaxin-related protein Nt-syr1TC122378 intracellular transport2.63.17.1ns
STMHA35Similar to mitochondrial substrate carrier familyTC112177 mitochondrial transport3.8ns3.4ns
STMGF07Proton-dependent oligopeptide transport (POT) family protein TC123895 oligiopeptide transport2.3ns5.7ns
STMHV73PDR11 ABC transporterTC113393 transport5.83.73.42.3
STMGR63Glutamate/malate translocatorTC119834 transport, energy8.24.2ns2.0
STMIK25Microtubule associated proteinTC128489 transport2.52.32.1ns
CELL WALL
STMHV17 STMGU64Similar to xyloglucan endo-1,4-beta-D-glucanase precursor TC128599 TC125027 cell wall4.25.3ns3.6
CELL RESCUE, PATHOGEN DEFENCE AND AGING
STMHQ43Similar to universal stress protein TC120304 response to stressns2.32.8ns
Response to Oxidative Stress
STMEC68Aldehyde dehydrogenase family 7 memberTC119606 aldehyd metabolism3.43.6ns2.3
Abiotic Stress
STMHK44Chloroplast small heat shock protein class ITC113156 Tresponse to heat stress4.75.32.5ns
STMHR9270kD heat shock proteinTC125185 response to heat stress2.32.73.8ns
STMGD72Class II small heat shock protein Le-HSP17.6TC119946 TC119947 response to heat, response to osmotic stress9.98.2ns2.6
STMEW74Ci21A proteinTC125994 response to cold stress4.03.22.52.8
STMHZ25Ci21B proteinTC128226 response to cold stress3.02.7ns3.2
STMHQ27Dehydrin TAS14TC119280 response to water stress5.76.5ns5.1
STMJG89LEA 5 TC112718 response to water stress2.85.87.7ns
STMIH22 STMIW26LEA5TC112721response to water stress2.54.38.6ns
STMDW52LEA5TC112720response to water stress2.84.97.5ns
STMIM43LEA homolog (tomato)TC112719 response to water stress3.36.08.2ns
STMJO88LEA-18 TC117167 response to water stress2.92.52.0ns
STMGA34LEA-like protein ER5TC121446 response to water stress3.14.314.65.0
STMGU74Drought-responsive protein / drought-induced protein (Di21), LEA domainTC122011 response to water stress2.62.74.82.4
STMID37Similar to ERD4 protein TC121675 response to water stress3.52.73.62.6
Senescence
STMHV25Similar to senescence-associated protein-likeTC112690 senescence4.03.33.0ns
Pathogen Defense
STMIT83Avr9/Cf-9 rapidly elicited protein 180TC115776 pathogen defence2.3ns13.7ns
STMIC26Disease resistance protein homolog F18B3.230TC116660 pathogen defence2.3ns6.9ns
STMHY36Putative resistance protein, weakly similar to nematode resistance-like proteinTC132420 pathogen defence3.4ns2.5ns
UNCLASSIFIED
STMDP07AT3g29575/MWE13_2TC122137 unknown3.62.72.02.8
STMGT63Putative RING zinc finger protein-like proteinTC128001 unknown2.03.32.22.7
STMIB78Expressed proteinTC116496 unknown3.3ns12.2ns
STMEW07Expressed proteinTC128521 unknown3.0ns10.0ns
STMEU57Expressed proteinTC119865 unknown2.8ns8.2ns
STMES53expressed proteinTC127349 unknown3.3ns6.3ns
STMIV62GMFP5TC112193 unknown2.9ns6.1ns
STMJP67expressed proteinTC114458 unknown2.5ns5.9ns
STMHG16Fiber protein 1TC120692 unknown2.1ns4.6ns
STMDP77Tus (Ter binding protein)TC123933 unknown4.4ns4.5ns
STMEZ75Putative membrane proteinTC125829 unknown2.1ns4.2ns
STMHX41Leucine-rich repeat family proteinTC130398 unknown4.9ns4.2ns
STMEZ92expressed proteinTC123507 unknown2.0ns4.0ns
STMIR73AT3g29240/MXO21_9TC112776 unknown2.9ns3.9ns
STMEW71Similar to heavy-metal-associated domainTC116103 unknown2.3ns3.6ns
STMHF03F5O11.17TC119398 unknown2.9ns3.3ns
STMEZ82NAM (no apical meristem)-like proteinTC116997 unknown2.3ns3.1ns
STMIJ73Expressed proteinTC121899 unknown3.0ns2.4ns
STMJO83Weakly similar to Tol membrane spanning proteinTC123268 unknown2.2ns2.3ns
STMGX14Expressed proteinTC126198 TC126199 unknown2.1ns2.3ns
STMIA91SPX domain containing proteinTC131026 unknownns3.0ns5.1
STMJL39Putative RING zinc finger protein-like protein, weakly similar to dehydration-induced protein RD22-like proteinTC120988 unknownns2.9ns3.3
STMEW11DS2 proteinTC119760 unknownns3.6ns2.9
STMDZ09 STMEJ47Similar to basic helix-loop-helix protein SPATULATC113473 unknownns2.6ns2.3
STMIN11Weakly similar to A-agglutinin attachment subunit precursorTC118657 unknownns2.1ns2.1
STMGQ17 STMGY28Genomic DNA chromosome 3 P1 clone:MMM17TC128247 unknownns3.1ns2.1
STMEV66Expressed proteinTC114694 unknownns2.2ns2.1
STMIA81Weakly similar to zinc finger (C3HC4-type RING finger) familyTC115512 unknownns2.3ns2.1
STMDU63AKIN gammaTC126843 unknownns2.8ns2.0
STMGO59Expressed proteinTC123047 unknown3.44.45.1ns
STMIQ02Expressed proteinTC128908 unknown4.13.05.1ns
STMEN93expressed proteinTC113431 TC113432 unknown2.32.04.4ns
STMGS40Probable RING-H2 zinc finger proteinTC119302 unknown2.73.24.1ns
STMIA79 zinc finger (C3HC4-type RING finger) family protein TC121490 unknown2.52.63.0ns
STMEP37At1g02120/T7I23_26TC120372 unknown2.72.83.0ns
STMHZ63Expressed proteinTC120977 unknown2.24.92.7ns
STMGA83 STMJM53Expressed proteinTC122658 unknown3.24.02.5ns
STMCY59Hypothetical proteinTC120086 unknown2.73.12.4ns
STMEL34 STMHE32expressed proteinTC127455 TC127454 unknown2.13.52.4ns
STMIQ57Similar to Wsv453TC115035 unknown3.74.32.3ns
STMHP32remorin family protein TC126146 unknown2.43.62.1ns
STMGM73Hypothetical protein B1027A11.138TC124043 unknown10.09.3ns9.8
STMHS26Emb|CAB62340.1TC124852 unknown4.410.6ns7.9
STMGT96Expressed proteinTC122399 unknown3.23.6ns5.0
STMIM42Glycine-rich proteinTC115984 unknown3.03.0ns4.1
STMGG17M355TC130418 unknown2.33.1ns3.2
STMDI37Expressed proteinTC115645 unknown6.54.8ns3.0
STMGW86Expressed proteinTC123724 unknown4.35.3ns2.9
STMGO56probable C3HC4 zinc finger proteinTC123640 TC125015 unknown4.47.7ns2.7
STMEF70Putative ankyrin proteinTC113945 unknown6.411.3ns2.7
STMCU52Similar to WD-40 repeat family TC122287 unknown5.94.1ns2.5
STMCB11 STMCB12expressed proteinTC122239 unknown3.13.6ns2.2
STMGJ21 STMDO28PDI-like proteinTC125241 TC120332 unknown6.26.1ns2.1
STMHF48Weakly similar to transport inhibitor response 1 TC119832 unknown5.02.7ns2.0
STMCX11Expressed proteinTC114255 unknownns3.12.66.7
STMCG81Similar to transducin family protein / WD-40 repeat family protein TC122048 unknownns2.13.0ns
STMJP63MA3 proteinTC127832 unknownns2.52.7ns
STMHY63F59D6.6 proteinTC128336 unknownns2.02.1ns
STMHR21Weakly similar to SPX domain-containing proteinTC125190 unknown3.9nsns6.3
STMHP83expressed proteinTC122208 unknown4.7nsns2.7
STMGG96Expressed proteinTC122488 unknown2.1nsns2.3
STMCG49Expressed proteinTC112463 unknown2.4nsns2.1
STMGA48putative MtN19 TC114459 unknownns5.8ns15.0