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Genes induced and repressed in a time and clone specific manner under drought
SA2563Sullu
ProbeGene nameStGI TCFunctiond23d42d23d42
CELL GROWTH, CELL DIVISION AND DNA SYNTHESIS
STMEU55Extensin-like proteinTC114033 cell elongationns-6.02.1ns
STMGB59Expansin11TC120818 cell elongationns-3.0-2.22.8
STMDH16Alpha-expansin precursorTC121884 cell elongation-2.7ns-4.35.5
TRANSCRIPTION
Chromatin Remodeling
STMGF62Stress-inducible histone H1TC119154chromatin remodeling2.5nsns-2.0
Transcription Factor
STMIK39Ethylene-responsive element binding factorTC112188transcription factor4.0ns2.8-2.7
STMGO23 STMHU61Transcription factor CCAAT-bindingTC126872 TC126875 TC126873 transcription factor-3.7-3.52.5ns
STMDQ49Transcription factor CCAAT-binding TC126873 transcription factor-3.6-3.82.5ns
STMIZ05Similar to transcription factor YABBY family protein TC113712 transcription factorns-4.92.3ns
STMIY21 STMJK86Similar to zinc finger (B-box type) family proteinTC114962transcription control2.32.1-2.0ns
CELL COMMUNICATION AND SIGNALING
Signaling
STMGP51Rac GTPase activating protein 2 TC125506 signalingns-6.0ns2.1
Kinases and Phosphatases
STMEK24Putative protein kinaseTC128150 kinasensns-2.32.1
HORMONE-RELATED
STMJO04 STMJO04Gip1-like proteinTC113540 response to gibberellin-6.1nsns5.3
STMDR52 STMDR52Gip1-like proteinTC113541 response to gibberellin-5.5nsns6.1
STMIT53Auxin-response factorTC119826 response to auxinns-3.22.2-5.9
PROTEIN DESTINATION AND TURN-OVER
STMJN87Farnesyltransferase beta chain TC128495 protein modification-2.3-3.42.0ns
STMIP70SBT4B proteinTC124128 protein degradation-3.9-3.0ns4.5
STMCM82Similar to aspartyl protease family TC119332 protein degradation-3.6-5.1ns7.8
STMCL26 STMCX33 STMCV60Cysteine protease inhibitor 1 precursor (PCPI 8.3) (P340) (P34021). {Solanum tuberosum;}TC111727 protein degradationns-2.8-8.03.0
STMHQ67Cysteine protease inhibitor 1 precursor (PCPI 8.3) (P340) (P34021). {Solanum tuberosum;}TC111708 TC111710 TC111750 TC111831 TC111924 protein degradationnsns-5.82.3
STMDB78Cysteine protease inhibitor 4 TC112274 proteinase inhibitornsns-2.418.0
STMCQ55Aspartic protease inhibitor 10 precursor TC111943 TC111946 TC112003 proteinase inhibitorns-2.4ns3.2
METABOLISM
Carbohydrate Metabolism
Sugar Interconversion
STMET38Similar to nucleotide sugar epimerase-like protein TC112345 glucose galactose interconversion-2.6-4.92.1ns
Glucanases, Glycosyltransferases
STMIU93Similar to glycosyl transferase family 20 protein / trehalose-phosphatase family proteinTC128467 glycosyltransferasens-2.44.5ns
Nitrogen Metabolism
STMDM46Glutamate synthase chloroplast precursorTC119844 N-metabolismnsns-3.03.0
Amino Acid Metabolism
STMEJ12Asparagine synthetaseTC126200 TC126201 alanine and aspartate metabolismns3.5-3.412.0
STMCX38L-asparaginaseTC119405 alanine and aspartate metabolismns-5.22.1ns
Lipid Metabolism
STMHY52Patatin class I precursor TC112006 lipid metabolismnsns5.2-13.4
STMGG43 STMHU29 Class I patatin TC111997 lipid metabolismnsns2.7-9.7
STMGD48 STMGN35Patatin T5 precursor (Potato tuber protein). {Solanum tuberosum;}TC112007 TC111994 TC112005 TC125981 lipid metabolismnsns4.3-7.1
STMHL62Patatin T5 precursor TC125982 TC111999 lipid metabolismnsns3.6-7.0
STMHA69 patatin precursor non-sucrose-inducible TC112010 TC112013 TC111993 lipid metabolismnsns7.4-16.2
STMGX77Similar to GDSL-like lipase/acylhydrolaseTC122805 lipid metabolism-2.3-3.0ns2.3
STMIH07Phospholipase A2TC116136 phosphoglycerolipid metabolism-2.1ns2.3ns
STMDS80Similar to phospholipase/carboxylesteraseTC122884 phosphoglycerolipid metabolism-4.7-8.03.7-7.7
Nucleotide Metabolism
STMGA89Ribose-phosphate diphosphokinaseTC120795 purine metabolismnsns2.4-2.7
Metabolism of Vitamins and Cofactors
STMIQ93Inositol-1(or 4)-monophosphatase 3 TC121318 inositol phosphate metabolismns-2.32.2ns
Secondary (Aromatic) Metabolism
STMHP28Chalcone synthase 2 TC117356 TC120450 flavanoid biosynthesisns-5.310.6ns
STMHO88Flavonoid 3'-monooxygenase TC112643 TC115343 flavanoid metabolismns-3.92.9ns
STMDB35Flavanone 3 beta-hydroxylaseTC113679 flavanoid metabolismns-2.64.4ns
STMHT73Flavonoid 3'-monooxygenase TC112644 flavanoid metabolismns-5.03.3ns
STMEG89 STMGP48PeroxidaseTC118916 TC118916 peroxidasensns-2.76.0
STMJO36 STMEI69Catechol O-methyltransferase IIITC112932 polyphenol metabolismns-2.1ns2.0
Other Metabolical Activities
STMCR07Putative short-chain type alcohol dehydrogenaseTC113697 alcohol dehydrogenasensns2.5-2.7
TRANSPORT
STMIS86Sodium sulfate or dicarboxylate transporterTC127823 ion transport2.82.2-4.5ns
STMER74Ferric reductaseTC118743 TC127844 iron uptakens2.4ns-2.1
STMES93Ferric reductaseTC127844 iron uptakensns2.7-2.3
STMGR91Nitrate transporterTC116530 TC118367 N-transportnsns-2.22.2
STMEC08 STMEJ57Glucose-6-phosphate/phosphate translocator 2TC112240 sugar transport-2.7ns2.3-3.0
STMJB02Probable aquaporin NIP5.1 TC113434 water channelns-2.12.3ns
STMJG48ABC transporterTC125355 transportns-2.52.2ns
CELL WALL
STMGQ22Endo-beta-1 4-D-glucanaseTC113342 cellulose metabolismns-4.7-3.14.0
STMDF56Probable arabinogalactan protein precursorTC116556 cell wallns-13.22.55.8
STMGW15Similar to pectate lyase TC127806 TC127807 cell wall-7.5-8.7-3.23.5
STMHY50Pectin methylesterase isoform alphaTC125259 cell wallns-2.12.7ns
STMCC72 STMIJ58PolygalacturonaseTC112773 TC115247 cell wall-3.0-5.5ns5.7
STMIH65Probable polygalacturonase TC129099 cell wallns-12.7ns4.4
STMEP57Xyloglucan endo-1 4-beta-D-glucanaseTC123630 cell wallns-4.0ns3.6
STMJJ17Xyloglucan endotransglucosylase-hydrolase TC127417 TC127418 cell wallns-9.08.9-4.6
STMJB14Xyloglucan endotransglucosylase-hydrolase TC127417 TC127419 cell wallns-3.38.0-3.1
STMIG22Syringolide-induced protein 19-1-5TC127417 cell wallnsns11.8-4.0
CELL RESCUE, PATHOGEN DEFENCE AND AGING
Protein Stabilization
STMHW51Copper chaperoneTC122155 copper chaperone, response to ROS-2.2ns2.3ns
STMHX44Copper homeostasis factorTC129293 copper chaperone, response to ROS-2.5-3.72.3ns
STMGZ22 STMIY26Similar to DnaJ protein TC128206 protein folding-2.4-2.42.2ns
Response to Oxidative Stress
STMHG87Superoxide dismutaseTC126481 response to oxidative stress-4.0ns2.4ns
Abiotic Stress
STMEP32Similar to early-responsive to dehydrationTC131831 response to water stressns-3.42.0ns
STMDS08Dehydration-induced protein RD22-like proteinTC112054 TC112053 response to water stressns4.0-3.418.0
STMDS08 STMGT86 STMHJ26 STMDU35 STMGB30 STMCK80 STMGL87 STMHF49 STMDE64Dehydration-induced protein RD22-like protein TC112053 TC112055 response to water stressns3.6-2.814.2
STMGW11BURP domain-containing protein TC112057 TC112064response to water stressns3.8-2.714.8
STMGM04BURP domain-containing protein TC112062 response to water stressns3.3-3.110.8
STMGV14BURP domain-containing protein TC112066 TC112058 response to water stressns3.8-3.215.2
STMGM85BURP domain-containing protein TC112059 TC112053 response to water stressns3.9-3.614.9
STMGL30BURP domain-containing protein TC112064 TC112058 response to water stressns3.3-3.014.8
Senescence
STMJD77 STMIR01Similar to SAG101TC127665 senescencens-2.12.9ns
STMEW62 STMEW80 STMFB94 B12D proteinTC113491 senescencensns2.1-2.2
Pathogen Defense
STMIX39Homologue to chitin-binding lectin 1 TC111774 TC111911 pathogen defence-2.1-2.9ns2.7
STMJF08Xyloglucanase inhibitorTC120470 pathogen defence-3.9-2.94.4ns
UNCLASSIFIED
STMET55Similar to F-box family proteinTC120647 unknown-2.4-2.12.0-3.7
STMIO29At4g36570TC123637 unknown-5.0-14.73.7-4.5
STMIR53GBR5TC128710 unknown-2.4ns2.5ns
STMIH74F4P13.22 proteinTC117266 unknownns-7.4ns4.4
STMDP79expressed protein low similarity to early flowering protein 1 TC113820 unknownns-2.82.1-2.5
STMIJ11AT4g27700/T29A15_190 TC113918 unknown-2.6-2.22.5ns
STMIT90Expressed proteinTC122731 unknown-4.9-3.72.1ns
STMCM84 STMIX96Ultraviolet-B-repressible proteinTC126033unknown-2.4-2.32.1ns
STMIT58Weakly similar to DC1 domain-containing protein TC127401 unknown2.03.9-2.0ns
STMEI26AT3g60900/T4C21_310TC126465 unknown-3.9-8.7ns4.1
STMCY06 Expressed proteinTC129996 unknownns2.9-2.89.8
STMFA15 STMJM79 Expressed proteinTC121148 unknown2.5ns2.4-2.4
STMJJ23Putative ripening-related protein, weakly similar to 21 kDa protein precursorTC114318 unknownns-2.67.3ns
STMDB95Expressed proteinTC120924 unknownns-2.62.7ns
STMGQ88 STMCR42Expressed proteinTC127024 TC127025 TC132234 unknownns-3.52.5ns
STMCR43 STMCS03STS14 protein precursorTC127579 unknownns-2.82.4ns
STMIL03Expressed proteinTC115816 unknownns-2.32.3ns
STMIV46Orf proteinTC122218 unknownns-3.42.1ns
STMJD48GPI-anchored proteinTC121018 unknownns-2.42.0ns
STMJF28Methyltransferase-related TC120968 unknownnsns2.0-2.0
STMGH31Expressed proteinTC124140 unknownnsns2.7-2.0
STMET08Weakly similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinTC128896 unknownnsns2.3-2.2
STMGA88Expressed proteinTC114092 unknownnsns2.5-2.2