Attached Files

  Name Size Creator Creation Date Labels Comment  
PDF File CIDA Final Report (002).pdf 687 kB EMIHOVILOVICH May 24, 2016 11:50
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CIDA Final Report May 2016
File GS_Models_LB-BGLR package.R 4 kB EMIHOVILOVICH May 24, 2016 11:49
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R script to run GS in BGLR package for data on late blight resistance of 167 clones  
File Gapit_lb_PanelKQ .R 2 kB EMIHOVILOVICH May 24, 2016 11:44
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R script to run GWAS in GAPIT with data on late blight resistance of 167 clones  
Text File Chromosome_Location.txt 120 kB EMIHOVILOVICH May 24, 2016 11:42
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Chromosome position of 4738 SNP genotyped in 167 clones . Use this for GWAS in GAPIT package  
Text File G3_Panel.txt 342 kB EMIHOVILOVICH May 24, 2016 11:39
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Kinship relationship matrix between 167 clones. Use this for GWAS and GS  
Text File Qmatrix_Panel.txt 3 kB EMIHOVILOVICH May 24, 2016 11:32
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Membership of 167 clones to subpopulations. Use this for GWAS only  
Text File LB_TRAIT.txt 3 kB EMIHOVILOVICH May 24, 2016 11:31
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Phenotypic data for LB resistance of 167 clones . Use this for practicing GWAS and GS  
Text File X-4738_SNP.txt 2.20 MB EMIHOVILOVICH May 24, 2016 11:26
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Genotypic matrix of 167 genotypes evaluated for late blight. Use this to pracrtice GWAS and GS  
Microsoft Excel Sheet Chromosome Positions 4738 SolCAP SN… 120 kB EMIHOVILOVICH May 24, 2016 09:46
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Chromosome Positions of 4738 SolCAP SNP genotyped in 171 breeding lines  
Microsoft Word Document Thesis_Identification of Chrs.Regio… 2.36 MB EMIHOVILOVICH May 24, 2016 09:41
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Master Degree Thesis Research _ Maria Caraza _ Dalhousie University
Microsoft Excel Spreadsheet TS progenies from selected early bu… 22 kB EMIHOVILOVICH May 24, 2016 09:39
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True seed amount of crosses performed with top selected parents for adaptation to warm long day-length conditions
Microsoft Excel Spreadsheet Top 30 clones selected for their ea… 13 kB EMIHOVILOVICH May 24, 2016 09:38
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Clones selected for early tuberization and bulking under warm long day-length conditions
PDF File BGLR-extdoc.pdf 411 kB EMIHOVILOVICH May 24, 2016 09:29
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User's Manual for GS
PDF File gapit_help_document.pdf 1.76 MB EMIHOVILOVICH May 24, 2016 09:29
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User's Manual for GWAS
Microsoft Excel Spreadsheet SNP-based kinship relationship matr… 423 kB EMIHOVILOVICH May 24, 2016 09:28
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171 x 171 G3 kinship relationship matrix
Microsoft Excel Spreadsheet Membership_Population.xlsx 12 kB EMIHOVILOVICH May 24, 2016 09:25
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Membership of genotypes to subpopulations according to Structure Analysis
Microsoft Excel Spreadsheet Table S1 Adjusted mean values for t… 9.90 MB EMIHOVILOVICH May 24, 2016 09:24
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Phenotypic data, Long, and shortday length tuberization traits and late blight suscpetibility level
Microsoft Excel Spreadsheet Table S2. Matrix of Genotypic Data.… 7.12 MB EMIHOVILOVICH May 24, 2016 09:21
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171 genotypes_4,738 SolCAP SNP
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