Integrating genomics assisted breeding and novel selection methods for enhancing application and uptake of potato technologies in South Asia, CCLF Project No 320805
| Name | Size | Creator | Creation Date | Labels | Comment | ||
|---|---|---|---|---|---|---|---|
| Microsoft Excel Spreadsheet Table S2. Matrix of Genotypic Data.… | 7.12 MB | EMIHOVILOVICH | May 24, 2016 |
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171 genotypes_4,738 SolCAP SNP | ||
| Microsoft Excel Spreadsheet Table S1 Adjusted mean values for t… | 9.90 MB | EMIHOVILOVICH | May 24, 2016 |
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Phenotypic data, Long, and shortday length tuberization traits and late blight suscpetibility level | ||
| Microsoft Excel Spreadsheet Membership_Population.xlsx | 12 kB | EMIHOVILOVICH | May 24, 2016 |
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Membership of genotypes to subpopulations according to Structure Analysis | ||
| Microsoft Excel Spreadsheet SNP-based kinship relationship matr… | 423 kB | EMIHOVILOVICH | May 24, 2016 |
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171 x 171 G3 kinship relationship matrix | ||
| PDF File gapit_help_document.pdf | 1.76 MB | EMIHOVILOVICH | May 24, 2016 |
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User's Manual for GWAS | ||
| PDF File BGLR-extdoc.pdf | 411 kB | EMIHOVILOVICH | May 24, 2016 |
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User's Manual for GS | ||
| Microsoft Excel Spreadsheet Top 30 clones selected for their ea… | 13 kB | EMIHOVILOVICH | May 24, 2016 |
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Clones selected for early tuberization and bulking under warm long day-length conditions | ||
| Microsoft Excel Spreadsheet TS progenies from selected early bu… | 22 kB | EMIHOVILOVICH | May 24, 2016 |
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True seed amount of crosses performed with top selected parents for adaptation to warm long day-length conditions | ||
| Microsoft Word Document Thesis_Identification of Chrs.Regio… | 2.36 MB | EMIHOVILOVICH | May 24, 2016 |
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Master Degree Thesis Research _ Maria Caraza _ Dalhousie University | ||
| Microsoft Excel Sheet Chromosome Positions 4738 SolCAP SN… | 120 kB | EMIHOVILOVICH | May 24, 2016 |
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Chromosome Positions of 4738 SolCAP SNP genotyped in 171 breeding lines | ||
| Text File X-4738_SNP.txt | 2.20 MB | EMIHOVILOVICH | May 24, 2016 |
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Genotypic matrix of 167 genotypes evaluated for late blight. Use this to pracrtice GWAS and GS | ||
| Text File LB_TRAIT.txt | 3 kB | EMIHOVILOVICH | May 24, 2016 |
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Phenotypic data for LB resistance of 167 clones . Use this for practicing GWAS and GS | ||
| Text File Qmatrix_Panel.txt | 3 kB | EMIHOVILOVICH | May 24, 2016 |
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Membership of 167 clones to subpopulations. Use this for GWAS only | ||
| Text File G3_Panel.txt | 342 kB | EMIHOVILOVICH | May 24, 2016 |
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Kinship relationship matrix between 167 clones. Use this for GWAS and GS | ||
| Text File Chromosome_Location.txt | 120 kB | EMIHOVILOVICH | May 24, 2016 |
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Chromosome position of 4738 SNP genotyped in 167 clones . Use this for GWAS in GAPIT package | ||
| File Gapit_lb_PanelKQ .R | 2 kB | EMIHOVILOVICH | May 24, 2016 |
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R script to run GWAS in GAPIT with data on late blight resistance of 167 clones | ||
| File GS_Models_LB-BGLR package.R | 4 kB | EMIHOVILOVICH | May 24, 2016 |
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R script to run GS in BGLR package for data on late blight resistance of 167 clones | ||
| PDF File CIDA Final Report (002).pdf | 687 kB | EMIHOVILOVICH | May 24, 2016 |
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CIDA Final Report May 2016 |